Image analysis with Python and Napari - A Helmholtz Imaging Summer Academy 2022#


In this Jupyter book we will introduce you to the basics of image processing Python and Napari. The one-day course is focused on processing microscopy images showing cells and nuclei. We will dive through segmenting objects, measuring their properties, managing measurements in tables and plotting results.

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We would like to acknowledge all contributors who spend time in the past years to make slides and notebooks we are reusing there, in particular Johannes Müller (PoL, TU Dresden) and Benoit Lombardot (MPI-CBG Dresden). This project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence “Physics of Life” of TU Dresden. We also acknowledge Helmholtz Imaging Platform for organizing and funding this course.